Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Hcn1O88704 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.23□□□□□ -0.61
Hcn1O88704 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm23912-201ENSMUST00000104687 87 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hcn1O88704 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm11439-201ENSMUST00000118598 409 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Hcn1O88704 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm4034-201ENSMUST00000187674 480 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm18711-201ENSMUST00000199341 750 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm45433-201ENSMUST00000209386 247 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hcn1O88704 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hcn1O88704 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Hcn1O88704 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm8385-201ENSMUST00000058999 643 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hcn1O88704 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hcn1O88704 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.22□□□□□ -0.61
Hcn1O88704 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.21□□□□□ -0.61
Hcn1O88704 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.21□□□□□ -0.61
Hcn1O88704 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.21□□□□□ -0.61
Hcn1O88704 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Hcn1O88704 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Gm14208-201ENSMUST00000119645 678 ntBASIC11.21□□□□□ -0.61
Hcn1O88704 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 Gm24990-201ENSMUST00000157406 323 ntBASIC11.21□□□□□ -0.61
Hcn1O88704 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Gm5363-201ENSMUST00000211927 938 ntBASIC11.21□□□□□ -0.61
Hcn1O88704 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.21□□□□□ -0.61
Hcn1O88704 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.21□□□□□ -0.61
Hcn1O88704 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hcn1O88704 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms