Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
ChkaO54804 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.81□□□□□ -0.52
ChkaO54804 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.81□□□□□ -0.52
ChkaO54804 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
ChkaO54804 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ChkaO54804 Gm17376-201ENSMUST00000166016 84 ntBASIC11.81□□□□□ -0.52
ChkaO54804 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.81□□□□□ -0.52
ChkaO54804 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.81□□□□□ -0.52
ChkaO54804 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.81□□□□□ -0.52
ChkaO54804 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.81□□□□□ -0.52
ChkaO54804 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.81□□□□□ -0.52
ChkaO54804 Gm5705-201ENSMUST00000066241 711 ntBASIC11.81□□□□□ -0.52
ChkaO54804 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ChkaO54804 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.81□□□□□ -0.52
ChkaO54804 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.81□□□□□ -0.52
ChkaO54804 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ChkaO54804 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ChkaO54804 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.81□□□□□ -0.52
ChkaO54804 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ChkaO54804 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
ChkaO54804 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.8□□□□□ -0.52
ChkaO54804 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.8□□□□□ -0.52
ChkaO54804 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.8□□□□□ -0.52
ChkaO54804 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.8□□□□□ -0.52
ChkaO54804 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.8□□□□□ -0.52
ChkaO54804 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ChkaO54804 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ChkaO54804 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.79□□□□□ -0.52
ChkaO54804 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ChkaO54804 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ChkaO54804 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ChkaO54804 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ChkaO54804 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms