Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.67□□□□□ -0.38
Per1O35973 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.67□□□□□ -0.38
Per1O35973 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Gm5996-201ENSMUST00000211110 718 ntBASIC12.67□□□□□ -0.38
Per1O35973 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.67□□□□□ -0.38
Per1O35973 Gm29787-201ENSMUST00000222129 849 ntBASIC12.67□□□□□ -0.38
Per1O35973 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.67□□□□□ -0.38
Per1O35973 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Per1O35973 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.67□□□□□ -0.38
Per1O35973 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.67□□□□□ -0.38
Per1O35973 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.67□□□□□ -0.38
Per1O35973 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Per1O35973 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Per1O35973 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.66□□□□□ -0.38
Per1O35973 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Per1O35973 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.66□□□□□ -0.38
Per1O35973 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.66□□□□□ -0.38
Per1O35973 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Per1O35973 Gm25148-201ENSMUST00000104611 123 ntBASIC12.66□□□□□ -0.38
Per1O35973 Gm11246-201ENSMUST00000120880 345 ntBASIC12.66□□□□□ -0.38
Per1O35973 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.66□□□□□ -0.38
Per1O35973 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Gm44315-201ENSMUST00000203041 219 ntBASIC12.66□□□□□ -0.38
Per1O35973 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.66□□□□□ -0.38
Per1O35973 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.66□□□□□ -0.38
Per1O35973 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.66□□□□□ -0.38
Per1O35973 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.66□□□□□ -0.38
Per1O35973 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.66□□□□□ -0.38
Per1O35973 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Per1O35973 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Per1O35973 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Per1O35973 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Per1O35973 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Per1O35973 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.65□□□□□ -0.38
Per1O35973 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Per1O35973 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.65□□□□□ -0.38
Per1O35973 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.65□□□□□ -0.38
Per1O35973 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.65□□□□□ -0.38
Per1O35973 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.65□□□□□ -0.38
Per1O35973 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.65□□□□□ -0.38
Per1O35973 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.65□□□□□ -0.38
Per1O35973 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms