Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.43□□□□□ -0.58
Npc1O35604 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Gm23251-201ENSMUST00000103773 110 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.43□□□□□ -0.58
Npc1O35604 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Gm6114-201ENSMUST00000182472 968 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.43□□□□□ -0.58
Npc1O35604 Gm28686-201ENSMUST00000187404 609 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Gm1821-202ENSMUST00000227415 750 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Npc1O35604 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.43□□□□□ -0.58
Npc1O35604 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Npc1O35604 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.43□□□□□ -0.58
Npc1O35604 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Npc1O35604 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.43□□□□□ -0.58
Npc1O35604 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.43□□□□□ -0.58
Npc1O35604 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npc1O35604 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.42□□□□□ -0.58
Npc1O35604 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.42□□□□□ -0.58
Npc1O35604 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Npc1O35604 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Npc1O35604 Gm13809-201ENSMUST00000117921 597 ntBASIC11.42□□□□□ -0.58
Npc1O35604 Gm13045-201ENSMUST00000119019 712 ntBASIC11.42□□□□□ -0.58
Npc1O35604 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Npc1O35604 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.42□□□□□ -0.58
Npc1O35604 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.42□□□□□ -0.58
Npc1O35604 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.42□□□□□ -0.58
Npc1O35604 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.42□□□□□ -0.58
Npc1O35604 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Npc1O35604 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Npc1O35604 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npc1O35604 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Npc1O35604 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.41□□□□□ -0.58
Npc1O35604 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Npc1O35604 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms