Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm4310-201ENSMUST00000177847 889 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm28071-201ENSMUST00000190355 478 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm38314-201ENSMUST00000195709 625 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm43438-201ENSMUST00000198133 379 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm26448-201ENSMUST00000082446 203 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Erich3-203ENSMUST00000189969 3460 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Rgr-203ENSMUST00000225070 4704 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm28937-201ENSMUST00000185413 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm29400-201ENSMUST00000187208 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm28686-201ENSMUST00000187404 609 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm28662-201ENSMUST00000188446 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm28251-201ENSMUST00000188835 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm37318-201ENSMUST00000194325 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm38117-201ENSMUST00000194653 939 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm38017-201ENSMUST00000194768 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm7003-201ENSMUST00000195089 312 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm37287-201ENSMUST00000195449 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm37793-201ENSMUST00000195548 695 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Rps4l-202ENSMUST00000204242 789 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.01□□□□□ -0.49
Atf6F6VAN0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atf6F6VAN0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Atf6F6VAN0 Gm37014-201ENSMUST00000194723 2253 ntBASIC12□□□□□ -0.49
Atf6F6VAN0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atf6F6VAN0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atf6F6VAN0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Atf6F6VAN0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Atf6F6VAN0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12□□□□□ -0.49
Atf6F6VAN0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 Gm12201-201ENSMUST00000120657 1234 ntBASIC12□□□□□ -0.49
Atf6F6VAN0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12□□□□□ -0.49
Atf6F6VAN0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 Mir7677-201ENSMUST00000184226 67 ntBASIC12□□□□□ -0.49
Atf6F6VAN0 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12□□□□□ -0.49
Atf6F6VAN0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atf6F6VAN0 AC154171.1-201ENSMUST00000224610 643 ntBASIC12□□□□□ -0.49
Atf6F6VAN0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms