Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ube4aE9Q735 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14□□□□□ -0.17
Ube4aE9Q735 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 AC129308.3-201ENSMUST00000225652 524 ntBASIC14□□□□□ -0.17
Ube4aE9Q735 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ube4aE9Q735 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4aE9Q735 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm25148-201ENSMUST00000104611 123 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm14270-201ENSMUST00000118388 846 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm12990-201ENSMUST00000120372 468 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm9135-201ENSMUST00000182963 990 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm35960-201ENSMUST00000202712 767 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ube4aE9Q735 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm11340-201ENSMUST00000119226 412 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm22877-201ENSMUST00000175451 105 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 Mir7051-201ENSMUST00000184167 73 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms