Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim30cD3YVI9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm23119-201ENSMUST00000158610 140 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm44958-201ENSMUST00000203734 736 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim30cD3YVI9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm28975-201ENSMUST00000186412 686 ntBASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm43084-201ENSMUST00000200696 947 ntBASIC12.84□□□□□ -0.35
Trim30cD3YVI9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim30cD3YVI9 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.83□□□□□ -0.35
Trim30cD3YVI9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.83□□□□□ -0.36
Trim30cD3YVI9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms