Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm4294-201ENSMUST00000105169 614 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm16301-201ENSMUST00000161959 295 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm43564-201ENSMUST00000196185 211 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm30946-201ENSMUST00000198288 724 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm18119-201ENSMUST00000219972 616 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 AC101205.2-201ENSMUST00000226206 715 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm5278-201ENSMUST00000055957 552 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.4□□□□□ -0.91
Chd6A3KFM7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.4□□□□□ -0.91
Chd6A3KFM7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm20091-201ENSMUST00000179683 189 ntBASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm9102-201ENSMUST00000219250 465 ntBASIC9.4□□□□□ -0.91
Chd6A3KFM7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd6A3KFM7 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC9.4□□□□□ -0.91
Chd6A3KFM7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.39□□□□□ -0.91
Chd6A3KFM7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gm8707-201ENSMUST00000183325 980 ntBASIC9.39□□□□□ -0.91
Chd6A3KFM7 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.39□□□□□ -0.91
Chd6A3KFM7 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Map1b-203ENSMUST00000223725 2669 ntBASIC9.39□□□□□ -0.91
Chd6A3KFM7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gm17147-201ENSMUST00000164176 432 ntBASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gm4960-201ENSMUST00000182928 1001 ntBASIC9.39□□□□□ -0.91
Chd6A3KFM7 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 AC124772.3-201ENSMUST00000222535 575 ntBASIC9.39□□□□□ -0.91
Chd6A3KFM7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms