Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm25668-201ENSMUST00000157700 129 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm45433-201ENSMUST00000209386 247 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm270-201ENSMUST00000223010 976 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb1A2AQ07 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Gm23949-201ENSMUST00000104027 127 ntBASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Gm11439-201ENSMUST00000118598 409 ntBASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Mir1938-201ENSMUST00000158746 100 ntBASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Gm7940-201ENSMUST00000218195 769 ntBASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb1A2AQ07 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.93□□□□□ -0.5
Tubb1A2AQ07 Gm14071-201ENSMUST00000117817 509 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms