Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2aQ9DB34 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Gm11663-201ENSMUST00000117888 290 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Gm4310-201ENSMUST00000177847 889 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Mir7070-201ENSMUST00000183657 86 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Gm2553-201ENSMUST00000215986 605 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Gm10288-201ENSMUST00000084614 537 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2aQ9DB34 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Rgr-203ENSMUST00000225070 4704 ntBASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2aQ9DB34 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Gm11450-201ENSMUST00000121144 333 ntBASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Gm37246-201ENSMUST00000192665 835 ntBASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Gm38117-201ENSMUST00000194653 939 ntBASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Gm45575-201ENSMUST00000210283 548 ntBASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Gm5369-201ENSMUST00000217499 588 ntBASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2aQ9DB34 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms