Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3a3Q9D554 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.79□□□□□ -0.52
Sf3a3Q9D554 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3a3Q9D554 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3a3Q9D554 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.79□□□□□ -0.52
Sf3a3Q9D554 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3a3Q9D554 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3a3Q9D554 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm13492-201ENSMUST00000119772 665 ntBASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.78□□□□□ -0.52
Sf3a3Q9D554 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm17931-201ENSMUST00000208132 634 ntBASIC11.78□□□□□ -0.52
Sf3a3Q9D554 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm10076-201ENSMUST00000073238 384 ntBASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3a3Q9D554 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3a3Q9D554 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm12314-201ENSMUST00000118104 538 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm28911-201ENSMUST00000188837 117 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm7287-201ENSMUST00000205267 602 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm2423-201ENSMUST00000074863 733 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3a3Q9D554 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms