Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Gm37028-201ENSMUST00000194276 107 ntBASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Gm44158-201ENSMUST00000203881 505 ntBASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Stag1Q9D3E6 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.96□□□□□ -0.17
Stag1Q9D3E6 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Stag1Q9D3E6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Stag1Q9D3E6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Stag1Q9D3E6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Stag1Q9D3E6 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.96□□□□□ -0.18
Stag1Q9D3E6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Stag1Q9D3E6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Stag1Q9D3E6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Stag1Q9D3E6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Gm22442-201ENSMUST00000157256 144 ntBASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.95□□□□□ -0.18
Stag1Q9D3E6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.95□□□□□ -0.18
Stag1Q9D3E6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Gm24398-201ENSMUST00000157870 109 ntBASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.94□□□□□ -0.18
Stag1Q9D3E6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.94□□□□□ -0.18
Stag1Q9D3E6 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.94□□□□□ -0.18
Stag1Q9D3E6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms