Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Mms19Q9D071 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mms19Q9D071 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm9062-201ENSMUST00000117712 727 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm22334-201ENSMUST00000158070 133 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm24514-201ENSMUST00000174961 285 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Spcs1-203ENSMUST00000226374 592 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Gm10288-201ENSMUST00000084614 537 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.55□□□□□ -0.4
Mms19Q9D071 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.55□□□□□ -0.4
Mms19Q9D071 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mms19Q9D071 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.55□□□□□ -0.4
Mms19Q9D071 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mms19Q9D071 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.54□□□□□ -0.4
Mms19Q9D071 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Mms19Q9D071 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Gm11331-201ENSMUST00000119764 288 ntBASIC12.54□□□□□ -0.4
Mms19Q9D071 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mms19Q9D071 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.54□□□□□ -0.4
Mms19Q9D071 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Mms19Q9D071 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.54□□□□□ -0.4
Mms19Q9D071 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.54□□□□□ -0.4
Mms19Q9D071 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.54□□□□□ -0.4
Mms19Q9D071 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.54□□□□□ -0.4
Mms19Q9D071 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.54□□□□□ -0.4
Mms19Q9D071 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Mms19Q9D071 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Mms19Q9D071 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mms19Q9D071 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Mms19Q9D071 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Mms19Q9D071 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mms19Q9D071 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mms19Q9D071 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mms19Q9D071 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mms19Q9D071 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms