Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Gm17420-201ENSMUST00000164753 153 ntBASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Gm27572-201ENSMUST00000183702 255 ntBASIC12.04□□□□□ -0.48
Snf8Q9CZ28 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Gm10312-201ENSMUST00000078515 489 ntBASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.03□□□□□ -0.48
Snf8Q9CZ28 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Snf8Q9CZ28 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms