Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Rprl1-201ENSMUST00000158050 327 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Gm45784-201ENSMUST00000188360 142 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Gm37201-201ENSMUST00000191845 523 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Gm14660-201ENSMUST00000119809 575 ntBASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Gm24548-201ENSMUST00000158650 108 ntBASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Mir7085-201ENSMUST00000184353 66 ntBASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Gm27731-201ENSMUST00000185192 107 ntBASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.82□□□□□ -0.68
Trim13Q9CYB0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim13Q9CYB0 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms