Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ska1Q9CPV1 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Ska1Q9CPV1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Ska1Q9CPV1 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Ska1Q9CPV1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm23931-201ENSMUST00000103842 109 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm14247-201ENSMUST00000120950 237 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm25043-201ENSMUST00000158604 212 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm43002-201ENSMUST00000200310 155 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm7046-201ENSMUST00000221351 977 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm25857-201ENSMUST00000082788 129 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ska1Q9CPV1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm12742-201ENSMUST00000117326 410 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm11793-201ENSMUST00000120433 981 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Rprl1-201ENSMUST00000158050 327 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms