Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm22323-201ENSMUST00000103832 109 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm14644-201ENSMUST00000116671 647 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm13296-201ENSMUST00000117854 997 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm15808-201ENSMUST00000119046 604 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm32999-201ENSMUST00000192693 562 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm17931-201ENSMUST00000208132 634 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp1b1Q99LU0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm12036-201ENSMUST00000120008 530 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm25890-201ENSMUST00000177643 165 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm25700-201ENSMUST00000177693 110 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm22614-201ENSMUST00000178300 165 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm22042-201ENSMUST00000082989 165 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm26110-201ENSMUST00000083971 165 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms