Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm3961-201ENSMUST00000204425 994 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm24255-201ENSMUST00000104481 128 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm20482-202ENSMUST00000174729 825 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm38317-201ENSMUST00000195564 343 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm38314-201ENSMUST00000195709 625 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm2553-201ENSMUST00000215986 605 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm5705-201ENSMUST00000066241 711 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cstf3Q99LI7 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm13665-201ENSMUST00000120830 528 ntBASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms