Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm23400-201ENSMUST00000174994 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm26463-201ENSMUST00000175065 101 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm24332-201ENSMUST00000175102 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm25959-201ENSMUST00000175112 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm22475-201ENSMUST00000175169 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm22903-201ENSMUST00000175193 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm25070-201ENSMUST00000175237 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm24159-201ENSMUST00000175264 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm25299-201ENSMUST00000175283 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm23798-201ENSMUST00000175560 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm23802-201ENSMUST00000175565 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm25708-201ENSMUST00000177687 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm24370-201ENSMUST00000178007 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm23049-201ENSMUST00000178068 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm28019-201ENSMUST00000178138 101 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm25571-201ENSMUST00000178322 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm25355-201ENSMUST00000178456 101 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm24975-201ENSMUST00000178492 101 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm23189-201ENSMUST00000178954 102 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm25100-201ENSMUST00000179750 101 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm23064-201ENSMUST00000179866 101 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 AC154305.2-201ENSMUST00000225813 901 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.43□□□□□ -0.1
RtcbQ99LF4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Gm11957-201ENSMUST00000118304 779 ntBASIC14.42□□□□□ -0.1
RtcbQ99LF4 Gm14497-201ENSMUST00000119537 580 ntBASIC14.42□□□□□ -0.1
RtcbQ99LF4 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.42□□□□□ -0.1
RtcbQ99LF4 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.42□□□□□ -0.1
RtcbQ99LF4 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.42□□□□□ -0.1
RtcbQ99LF4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RtcbQ99LF4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.41□□□□□ -0.1
RtcbQ99LF4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms