Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm25880-201ENSMUST00000104331 132 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm14071-201ENSMUST00000117817 509 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm11340-201ENSMUST00000119226 412 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm11700-201ENSMUST00000119409 403 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm23218-201ENSMUST00000158124 276 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm30671-201ENSMUST00000214898 318 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.37□□□□□ -0.27
Trex1Q91XB0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.37□□□□□ -0.27
Trex1Q91XB0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm14219-201ENSMUST00000120414 288 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm43163-201ENSMUST00000196571 442 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm42816-201ENSMUST00000198433 325 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms