Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.58□□□□□ -0.24
StrcQ8VIM6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.58□□□□□ -0.24
StrcQ8VIM6 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.58□□□□□ -0.24
StrcQ8VIM6 Gm14176-201ENSMUST00000121302 477 ntBASIC13.58□□□□□ -0.24
StrcQ8VIM6 Gm4917-201ENSMUST00000121452 650 ntBASIC13.58□□□□□ -0.24
StrcQ8VIM6 Gm14148-201ENSMUST00000122433 1008 ntBASIC13.58□□□□□ -0.24
StrcQ8VIM6 Gm4943-201ENSMUST00000132879 424 ntBASIC13.58□□□□□ -0.24
StrcQ8VIM6 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
StrcQ8VIM6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm42867-201ENSMUST00000202995 469 ntBASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm33080-201ENSMUST00000205429 172 ntBASIC13.57□□□□□ -0.24
StrcQ8VIM6 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm29689-201ENSMUST00000221076 589 ntBASIC13.57□□□□□ -0.24
StrcQ8VIM6 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.57□□□□□ -0.24
StrcQ8VIM6 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.57□□□□□ -0.24
StrcQ8VIM6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.57□□□□□ -0.24
StrcQ8VIM6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.57□□□□□ -0.24
StrcQ8VIM6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm12736-201ENSMUST00000119330 236 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm16288-201ENSMUST00000137940 367 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm4705-201ENSMUST00000177415 354 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm5738-201ENSMUST00000206016 779 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 AC163638.2-201ENSMUST00000224920 827 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.56□□□□□ -0.24
StrcQ8VIM6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
StrcQ8VIM6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms