Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC12.6□□□□□ -0.39
TraipQ8VIG6 Gm38314-201ENSMUST00000195709 625 ntBASIC12.6□□□□□ -0.39
TraipQ8VIG6 Gm9645-201ENSMUST00000197131 792 ntBASIC12.6□□□□□ -0.39
TraipQ8VIG6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Gm10752-201ENSMUST00000218348 729 ntBASIC12.6□□□□□ -0.39
TraipQ8VIG6 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.6□□□□□ -0.39
TraipQ8VIG6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Gm37813-201ENSMUST00000195003 3695 ntBASIC12.6□□□□□ -0.39
TraipQ8VIG6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TraipQ8VIG6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm38227-201ENSMUST00000193036 1602 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm44951-201ENSMUST00000206449 2024 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm12419-201ENSMUST00000116649 636 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm11451-201ENSMUST00000118946 630 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm8365-201ENSMUST00000197334 648 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm45635-201ENSMUST00000211516 2134 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.59□□□□□ -0.39
TraipQ8VIG6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TraipQ8VIG6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TraipQ8VIG6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
TraipQ8VIG6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
TraipQ8VIG6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TraipQ8VIG6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.39
TraipQ8VIG6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
TraipQ8VIG6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TraipQ8VIG6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TraipQ8VIG6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TraipQ8VIG6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TraipQ8VIG6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TraipQ8VIG6 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TraipQ8VIG6 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TraipQ8VIG6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TraipQ8VIG6 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms