Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh18Q8VHR0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh18Q8VHR0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh18Q8VHR0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh18Q8VHR0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Gm24548-201ENSMUST00000158650 108 ntBASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Gm4034-201ENSMUST00000187674 480 ntBASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh18Q8VHR0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms