Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Mir8109-201ENSMUST00000184375 117 ntBASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm38341-201ENSMUST00000195357 515 ntBASIC11.72□□□□□ -0.53
Vps39Q8R5L3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps39Q8R5L3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Gm24255-201ENSMUST00000104481 128 ntBASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Gm43630-201ENSMUST00000201550 776 ntBASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Rps4l-202ENSMUST00000204242 789 ntBASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps39Q8R5L3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps39Q8R5L3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gm13665-201ENSMUST00000120830 528 ntBASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.7□□□□□ -0.54
Vps39Q8R5L3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms