Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Gm44323-201ENSMUST00000198689 129 ntBASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 AC102847.1-202ENSMUST00000226313 1245 ntBASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 AC156790.2-201ENSMUST00000227115 568 ntBASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 AC169511.1-201ENSMUST00000227639 995 ntBASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Grk6-205ENSMUST00000224653 2976 ntBASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ddx54Q8K4L0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Gm8111-201ENSMUST00000117659 987 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Gm37851-201ENSMUST00000193871 889 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Rps3a2-201ENSMUST00000074245 792 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Rps3a3-201ENSMUST00000074680 795 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Map1b-203ENSMUST00000223725 2669 ntBASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx54Q8K4L0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Gm26875-201ENSMUST00000181006 950 ntBASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Gm31274-201ENSMUST00000197356 229 ntBASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Gm44814-201ENSMUST00000207018 434 ntBASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx54Q8K4L0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms