Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rtn1Q8K0T0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rtn1Q8K0T0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Rtn1Q8K0T0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rtn1Q8K0T0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rtn1Q8K0T0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rtn1Q8K0T0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Rtn1Q8K0T0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm16505-201ENSMUST00000179981 232 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm8100-201ENSMUST00000182906 988 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm2965-201ENSMUST00000198365 343 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 AU022133-201ENSMUST00000200601 873 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm45575-201ENSMUST00000210283 548 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.58□□□□□ -0.24
Rtn1Q8K0T0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Mir6927-201ENSMUST00000184494 71 ntBASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Gm9520-201ENSMUST00000209460 1253 ntBASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Gm7940-201ENSMUST00000218195 769 ntBASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Gm10288-201ENSMUST00000084614 537 ntBASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rtn1Q8K0T0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rtn1Q8K0T0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rtn1Q8K0T0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rtn1Q8K0T0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rtn1Q8K0T0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rtn1Q8K0T0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rtn1Q8K0T0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Rtn1Q8K0T0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms