Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gm11511-201ENSMUST00000118146 540 ntBASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gm13297-201ENSMUST00000120205 934 ntBASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28aQ8CEI3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Gm7046-201ENSMUST00000221351 977 ntBASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28aQ8CEI3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms