Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm2260-201ENSMUST00000184965 657 ntBASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Rprl1-202ENSMUST00000198476 238 ntBASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm18212-201ENSMUST00000211678 889 ntBASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm13461-201ENSMUST00000120980 662 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm32999-201ENSMUST00000192693 562 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm42997-202ENSMUST00000200321 985 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Lect2-202ENSMUST00000225183 823 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm10254-201ENSMUST00000052888 867 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcpip1Q8CDG3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vcpip1Q8CDG3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vcpip1Q8CDG3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vcpip1Q8CDG3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Gm11960-201ENSMUST00000122068 925 ntBASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Gm38314-201ENSMUST00000195709 625 ntBASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms