Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lysmd4Q8CC84 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm5370-201ENSMUST00000187187 574 ntBASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm5950-201ENSMUST00000213337 772 ntBASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lysmd4Q8CC84 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lysmd4Q8CC84 Snora78-201ENSMUST00000158630 128 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms