Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm16166-201ENSMUST00000118291 787 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm37981-201ENSMUST00000194280 535 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm43916-201ENSMUST00000205062 967 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm10254-201ENSMUST00000052888 867 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.61□□□□□ -0.23
Alx1Q8C8B0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Gm15549-201ENSMUST00000121595 622 ntBASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Gm8420-201ENSMUST00000097103 598 ntBASIC13.61□□□□□ -0.23
Alx1Q8C8B0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Alx1Q8C8B0 Paupar-201ENSMUST00000194826 3482 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm25148-201ENSMUST00000104611 123 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm9089-201ENSMUST00000122027 526 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm17391-201ENSMUST00000171036 126 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm7741-201ENSMUST00000181445 989 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm37458-201ENSMUST00000194055 410 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm45398-201ENSMUST00000210561 165 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm5451-201ENSMUST00000080545 579 ntBASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms