Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm18367-201ENSMUST00000176139 600 ntBASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm9555-201ENSMUST00000200908 583 ntBASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm43966-201ENSMUST00000203301 612 ntBASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm1821-202ENSMUST00000227415 750 ntBASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm12165-201ENSMUST00000117047 342 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm12407-201ENSMUST00000180219 324 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm19353-201ENSMUST00000184561 445 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm6905-201ENSMUST00000205729 511 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Ginm1-202ENSMUST00000065124 300 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Erich3-203ENSMUST00000189969 3460 ntBASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp44Q8C2S0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Gm22920-201ENSMUST00000102175 109 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Gm15374-201ENSMUST00000119313 844 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Gm23699-201ENSMUST00000158835 135 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp44Q8C2S0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms