Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gm6963-201ENSMUST00000147879 379 ntBASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm14644-201ENSMUST00000116671 647 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm19994-201ENSMUST00000217086 586 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Mir433-201ENSMUST00000093564 124 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trerf1Q8BXJ2 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms