Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 BC043934-202ENSMUST00000185694 2356 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm12857-201ENSMUST00000117678 592 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm15515-201ENSMUST00000117827 822 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm18734-201ENSMUST00000172937 808 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Srrm4Q8BKA3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm12196-201ENSMUST00000120954 262 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm26461-201ENSMUST00000175064 290 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm7848-201ENSMUST00000210739 718 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gm21811-201ENSMUST00000096485 930 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Srrm4Q8BKA3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms