Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trim6Q8BGE7 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim6Q8BGE7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Gm25116-201ENSMUST00000157191 122 ntBASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Gm37008-201ENSMUST00000195712 319 ntBASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim6Q8BGE7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms