Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm15004-201ENSMUST00000119192 630 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm3329-201ENSMUST00000159873 556 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm18711-201ENSMUST00000199341 750 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc85bQ6PDY0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm18776-201ENSMUST00000188833 654 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm37782-201ENSMUST00000194879 678 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm8768-201ENSMUST00000220020 826 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm9791-201ENSMUST00000060997 447 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm5451-201ENSMUST00000080545 579 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm23105-201ENSMUST00000083719 134 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc85bQ6PDY0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms