Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Casc4Q6P2L7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm23596-201ENSMUST00000104304 132 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm15004-201ENSMUST00000119192 630 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm27552-201ENSMUST00000183351 62 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm27844-201ENSMUST00000183613 62 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.88□□□□□ -0.51
Casc4Q6P2L7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Casc4Q6P2L7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm27530-201ENSMUST00000184096 98 ntBASIC11.87□□□□□ -0.51
Casc4Q6P2L7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Rps4l-202ENSMUST00000204242 789 ntBASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Casc4Q6P2L7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms