Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Gm3551-201ENSMUST00000190750 664 ntBASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Gm17877-201ENSMUST00000192578 814 ntBASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Gm44506-201ENSMUST00000206278 965 ntBASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Gm19091-201ENSMUST00000208120 978 ntBASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Gm28388-201ENSMUST00000186262 437 ntBASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdzrn3Q69ZS0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Gm12036-201ENSMUST00000120008 530 ntBASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms