Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC9□□□□□ -0.97
Foxc1Q61572 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 AC147101.1-201ENSMUST00000217964 312 ntBASIC9□□□□□ -0.97
Foxc1Q61572 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC9□□□□□ -0.97
Foxc1Q61572 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC9□□□□□ -0.97
Foxc1Q61572 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9□□□□□ -0.97
Foxc1Q61572 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Foxc1Q61572 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9□□□□□ -0.97
Foxc1Q61572 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Gm3287-205ENSMUST00000228893 1332 ntBASIC9□□□□□ -0.97
Foxc1Q61572 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Foxc1Q61572 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9□□□□□ -0.97
Foxc1Q61572 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Foxc1Q61572 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9□□□□□ -0.97
Foxc1Q61572 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Foxc1Q61572 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Foxc1Q61572 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm15703-201ENSMUST00000120250 880 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Foxc1Q61572 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm17376-201ENSMUST00000166016 84 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm21943-201ENSMUST00000178181 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm38158-201ENSMUST00000194617 339 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm44405-201ENSMUST00000198952 126 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm44837-201ENSMUST00000206863 717 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm7688-201ENSMUST00000212857 337 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 AC126673.2-201ENSMUST00000221052 686 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm8227-201ENSMUST00000223306 571 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 AC121912.1-201ENSMUST00000227525 1201 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.99□□□□□ -0.97
Foxc1Q61572 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Foxc1Q61572 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Foxc1Q61572 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms