Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Map1b-203ENSMUST00000223725 2669 ntBASIC12.55□□□□□ -0.4
Foxd4Q60688 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxd4Q60688 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm12400-201ENSMUST00000120915 1003 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Foxd4Q60688 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm38002-201ENSMUST00000193255 180 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm44837-201ENSMUST00000206863 717 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm44849-201ENSMUST00000207595 484 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm7344-201ENSMUST00000212122 1222 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 AC110816.1-201ENSMUST00000218559 980 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 AC132881.1-201ENSMUST00000223780 1062 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 AC131117.1-201ENSMUST00000225154 1171 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm12586-201ENSMUST00000117328 1316 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm44897-201ENSMUST00000206187 1341 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Gm42968-201ENSMUST00000198578 1372 ntBASIC12.54□□□□□ -0.4
Foxd4Q60688 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxd4Q60688 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxd4Q60688 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Vmn1r-ps110-201ENSMUST00000117530 1094 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm12757-201ENSMUST00000119465 800 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm24239-201ENSMUST00000157791 255 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm7584-201ENSMUST00000175829 940 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm20689-201ENSMUST00000176033 279 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.53□□□□□ -0.4
Foxd4Q60688 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm6222-202ENSMUST00000182143 629 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm8099-201ENSMUST00000200510 742 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm4768-201ENSMUST00000206199 686 ntBASIC12.53□□□□□ -0.4
Foxd4Q60688 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxd4Q60688 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms