Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm11544-201ENSMUST00000120215 382 ntBASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Mir7051-201ENSMUST00000184167 73 ntBASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm9369-201ENSMUST00000196009 733 ntBASIC11.85□□□□□ -0.51
Bdp1Q571C7 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm23432-201ENSMUST00000157181 131 ntBASIC11.85□□□□□ -0.51
Bdp1Q571C7 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.85□□□□□ -0.51
Bdp1Q571C7 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.85□□□□□ -0.51
Bdp1Q571C7 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Bdp1Q571C7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gm21778-201ENSMUST00000178779 471 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Mir6387-201ENSMUST00000184042 108 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gm44323-201ENSMUST00000198689 129 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gm2566-201ENSMUST00000201267 431 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.84□□□□□ -0.51
Bdp1Q571C7 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gm22495-201ENSMUST00000104492 126 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gm16219-201ENSMUST00000120096 274 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 AC124356.1-201ENSMUST00000221469 698 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.84□□□□□ -0.51
Bdp1Q571C7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Bdp1Q571C7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Bdp1Q571C7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Bdp1Q571C7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Bdp1Q571C7 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Bdp1Q571C7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.83□□□□□ -0.52
Bdp1Q571C7 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Bdp1Q571C7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.83□□□□□ -0.52
Bdp1Q571C7 Gm18124-201ENSMUST00000210695 706 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms