Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm21362-201ENSMUST00000194272 928 ntBASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm43002-201ENSMUST00000200310 155 ntBASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 AC192088.1-201ENSMUST00000227561 301 ntBASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm43773-201ENSMUST00000198548 2162 ntBASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Erich3-203ENSMUST00000189969 3460 ntBASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 AC122881.1-201ENSMUST00000225757 2695 ntBASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm6189-201ENSMUST00000164487 2082 ntBASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Gm27243-201ENSMUST00000183964 521 ntBASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cks1brtQ3UNC9 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms