Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm11475-201ENSMUST00000118482 476 ntBASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Gm15707-201ENSMUST00000118804 996 ntBASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Gm23694-201ENSMUST00000179335 110 ntBASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 AC102847.1-202ENSMUST00000226313 1245 ntBASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Gm6564-201ENSMUST00000075377 619 ntBASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Gm6478-201ENSMUST00000099450 742 ntBASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3b2Q3UJB0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm13171-201ENSMUST00000117233 391 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm12736-201ENSMUST00000119330 236 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm15982-201ENSMUST00000121681 554 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm13827-201ENSMUST00000148801 372 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm25569-201ENSMUST00000157175 131 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Mir8093-201ENSMUST00000185043 137 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm33707-201ENSMUST00000195135 569 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 CT025603.1-201ENSMUST00000224040 448 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 AC129975.1-201ENSMUST00000224816 592 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3b2Q3UJB0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 AC159810.1-201ENSMUST00000214838 1480 ntBASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Gm12389-201ENSMUST00000117696 418 ntBASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 AC156790.2-201ENSMUST00000227115 568 ntBASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3b2Q3UJB0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms