Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm24312-201ENSMUST00000178677 119 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm44304-201ENSMUST00000200509 145 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm5194-201ENSMUST00000221457 742 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Spg11Q3UHA3 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Fam220-ps-201ENSMUST00000116535 783 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm12435-201ENSMUST00000118949 1016 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm45225-201ENSMUST00000206852 1139 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Paupar-201ENSMUST00000194826 3482 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm12072-201ENSMUST00000118293 715 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm21631-201ENSMUST00000195041 754 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm29689-201ENSMUST00000221076 589 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Id2-203ENSMUST00000222667 958 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 AC163638.2-201ENSMUST00000224920 827 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Gm9701-201ENSMUST00000077976 427 ntBASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Spg11Q3UHA3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Gm37723-201ENSMUST00000194480 565 ntBASIC10.72□□□□□ -0.69
Spg11Q3UHA3 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.72□□□□□ -0.69
Spg11Q3UHA3 CU025215.1-201ENSMUST00000222986 603 ntBASIC10.72□□□□□ -0.69
Spg11Q3UHA3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Spg11Q3UHA3 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms