Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm27516-201ENSMUST00000184237 98 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm9257-201ENSMUST00000221254 232 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.42□□□□□ -0.42
Trim43aQ3TL54 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43aQ3TL54 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Gm38158-201ENSMUST00000194617 339 ntBASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Gm38341-201ENSMUST00000195357 515 ntBASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Morn2-202ENSMUST00000227729 656 ntBASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43aQ3TL54 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm15370-201ENSMUST00000117158 253 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms