Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Mir6922-201ENSMUST00000185099 66 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 AC090962.2-201ENSMUST00000225064 1801 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Gm5385-201ENSMUST00000118988 1559 ntBASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ush2AQ2QI47 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Gm24180-201ENSMUST00000179961 110 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Matn2-206ENSMUST00000228570 2798 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Zkscan3-207ENSMUST00000223831 2101 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Gm16044-201ENSMUST00000118475 450 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 AC163038.4-201ENSMUST00000224942 474 ntBASIC5.96□□□□□ -1.45
Ush2AQ2QI47 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ush2AQ2QI47 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Ighv1-67-201ENSMUST00000103538 294 ntBASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm43787-201ENSMUST00000197792 1037 ntBASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm7539-201ENSMUST00000189789 630 ntBASIC5.96□□□□□ -1.46
Ush2AQ2QI47 BC002189-201ENSMUST00000195674 598 ntBASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms