Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.25□□□□□ -0.61
Hoxc4Q08624 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm44329-201ENSMUST00000197469 112 ntBASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm17825-201ENSMUST00000206836 794 ntBASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxc4Q08624 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm15374-201ENSMUST00000119313 844 ntBASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm12899-201ENSMUST00000120565 551 ntBASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm17877-201ENSMUST00000192578 814 ntBASIC11.24□□□□□ -0.61
Hoxc4Q08624 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm7600-201ENSMUST00000209657 785 ntBASIC11.24□□□□□ -0.61
Hoxc4Q08624 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxc4Q08624 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms