Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Tff1Q08423 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Tff1Q08423 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Tff1Q08423 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.74□□□□□ -0.85
Tff1Q08423 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Tff1Q08423 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.74□□□□□ -0.85
Tff1Q08423 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm11531-201ENSMUST00000117614 555 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Gm12036-201ENSMUST00000120008 530 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm7722-201ENSMUST00000120646 741 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm26361-201ENSMUST00000158868 186 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.74□□□□□ -0.85
Tff1Q08423 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Tff1Q08423 Mir7032-201ENSMUST00000185154 79 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 AA914427-201ENSMUST00000193194 1166 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm8385-201ENSMUST00000058999 643 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Tff1Q08423 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.74□□□□□ -0.85
Tff1Q08423 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Erich3-203ENSMUST00000189969 3460 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.74□□□□□ -0.85
Tff1Q08423 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tff1Q08423 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tff1Q08423 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Rgr-203ENSMUST00000225070 4704 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms