Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 AC091783.1-201ENSMUST00000223614 1613 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col9a1Q05722 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.88□□□□□ -0.51
Col9a1Q05722 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.88□□□□□ -0.51
Col9a1Q05722 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm14550-201ENSMUST00000117918 407 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm14524-201ENSMUST00000121066 683 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Zfp419-201ENSMUST00000173446 916 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm26272-201ENSMUST00000179241 132 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm6216-201ENSMUST00000182390 687 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm42796-201ENSMUST00000199913 1087 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm2691-201ENSMUST00000203205 901 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm20136-201ENSMUST00000207501 891 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm44849-201ENSMUST00000207595 484 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Col9a1Q05722 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 AC121912.1-201ENSMUST00000227525 1201 ntBASIC11.88□□□□□ -0.51
Col9a1Q05722 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col9a1Q05722 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col9a1Q05722 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm23439-201ENSMUST00000104292 132 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm14480-201ENSMUST00000118521 433 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm15196-201ENSMUST00000121406 482 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm42464-202ENSMUST00000198111 774 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm2566-201ENSMUST00000201267 431 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms