Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm6963-201ENSMUST00000147879 379 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm5070-201ENSMUST00000177599 862 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm18187-201ENSMUST00000196476 984 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm5455-201ENSMUST00000058710 715 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.11□□□□□ -0.63
Cxcr5Q04683 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcr5Q04683 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Erich3-203ENSMUST00000189969 3460 ntBASIC11.1□□□□□ -0.63
Cxcr5Q04683 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Gm11660-201ENSMUST00000120955 412 ntBASIC11.1□□□□□ -0.63
Cxcr5Q04683 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Gm45598-202ENSMUST00000210719 986 ntBASIC11.1□□□□□ -0.63
Cxcr5Q04683 Gm18065-201ENSMUST00000221395 526 ntBASIC11.1□□□□□ -0.63
Cxcr5Q04683 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Gm9823-201ENSMUST00000051212 327 ntBASIC11.1□□□□□ -0.63
Cxcr5Q04683 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.1□□□□□ -0.63
Cxcr5Q04683 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcr5Q04683 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.09□□□□□ -0.63
Cxcr5Q04683 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cxcr5Q04683 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms