Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Gm25343-201ENSMUST00000157460 107 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.16□□□□□ -0.14
Snai1Q02085 Gm45856-201ENSMUST00000212752 416 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Gm2594-201ENSMUST00000214774 742 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 Gm9487-201ENSMUST00000216600 472 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.16□□□□□ -0.14
Snai1Q02085 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Snai1Q02085 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.16□□□□□ -0.14
Snai1Q02085 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.16□□□□□ -0.14
Snai1Q02085 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Snai1Q02085 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snai1Q02085 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Snai1Q02085 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Snai1Q02085 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Snai1Q02085 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Gm14165-201ENSMUST00000121456 952 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 Gm18801-201ENSMUST00000186616 536 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 Gm43249-201ENSMUST00000200464 458 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Snai1Q02085 Gm40879-201ENSMUST00000220759 612 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.15□□□□□ -0.14
Snai1Q02085 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snai1Q02085 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Snai1Q02085 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.14□□□□□ -0.15
Snai1Q02085 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.14□□□□□ -0.15
Snai1Q02085 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Snai1Q02085 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.14□□□□□ -0.15
Snai1Q02085 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Snai1Q02085 Gm11996-201ENSMUST00000117538 915 ntBASIC14.14□□□□□ -0.15
Snai1Q02085 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Gm25677-201ENSMUST00000174983 72 ntBASIC14.14□□□□□ -0.15
Snai1Q02085 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.14□□□□□ -0.15
Snai1Q02085 Gm9102-201ENSMUST00000219250 465 ntBASIC14.14□□□□□ -0.15
Snai1Q02085 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.14□□□□□ -0.15
Snai1Q02085 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Snai1Q02085 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.14□□□□□ -0.15
Snai1Q02085 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snai1Q02085 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snai1Q02085 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Snai1Q02085 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snai1Q02085 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.13□□□□□ -0.15
Snai1Q02085 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms